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* set eol-style.

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git-svn-id: svn+ssh://ci.ruby-lang.org/ruby/trunk@13944 b2dd03c8-39d4-4d8f-98ff-823fe69b080e
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nobu 2007-11-16 01:30:29 +00:00
parent 501407d3af
commit 75feee0968
27 changed files with 1744 additions and 1744 deletions
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60
benchmark/bm_so_reverse_complement.rb
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@ -1,30 +1,30 @@
#!/usr/bin/ruby
# The Great Computer Language Shootout
# http://shootout.alioth.debian.org/
#
# Contributed by Peter Bjarke Olsen
# Modified by Doug King
seq=Array.new
def revcomp(seq)
seq.reverse!.tr!('wsatugcyrkmbdhvnATUGCYRKMBDHVN','WSTAACGRYMKVHDBNTAACGRYMKVHDBN')
stringlen=seq.length
0.step(stringlen-1,60) {|x| print seq.slice(x,60) , "\n"}
end
input = open(File.join(File.dirname($0), 'fasta.output.2500000'), 'rb')
while input.gets
if $_ =~ />/
if seq.length != 0
revcomp(seq.join)
seq=Array.new
end
puts $_
else
$_.sub(/\n/,'')
seq.push $_
end
end
revcomp(seq.join)
#!/usr/bin/ruby
# The Great Computer Language Shootout
# http://shootout.alioth.debian.org/
#
# Contributed by Peter Bjarke Olsen
# Modified by Doug King
seq=Array.new
def revcomp(seq)
seq.reverse!.tr!('wsatugcyrkmbdhvnATUGCYRKMBDHVN','WSTAACGRYMKVHDBNTAACGRYMKVHDBN')
stringlen=seq.length
0.step(stringlen-1,60) {|x| print seq.slice(x,60) , "\n"}
end
input = open(File.join(File.dirname($0), 'fasta.output.2500000'), 'rb')
while input.gets
if $_ =~ />/
if seq.length != 0
revcomp(seq.join)
seq=Array.new
end
puts $_
else
$_.sub(/\n/,'')
seq.push $_
end
end
revcomp(seq.join)