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Kai Qiang Wu(Kennan) f7fe2f0992 Add sudo for related command

The du need sudo to perform to get correct results.

Signed-off-by: Kai Qiang Wu(Kennan) <wkqwu@cn.ibm.com>

2016-02-18 02:58:26 +00:00

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Understand images, containers, and storage drivers

To use storage drivers effectively, you must understand how Docker builds and stores images. Then, you need an understanding of how these images are used by containers. Finally, you'll need a short introduction to the technologies that enable both images and container operations.

Images and layers

Each Docker image references a list of read-only layers that represent filesystem differences. Layers are stacked on top of each other to form a base for a container's root filesystem. The diagram below shows the Ubuntu 15.04 image comprising 4 stacked image layers.

The Docker storage driver is responsible for stacking these layers and providing a single unified view.

When you create a new container, you add a new, thin, writable layer on top of the underlying stack. This layer is often called the "container layer". All changes made to the running container - such as writing new files, modifying existing files, and deleting files - are written to this thin writable container layer. The diagram below shows a container based on the Ubuntu 15.04 image.

Content addressable storage

Docker 1.10 introduced a new content addressable storage model. This is a completely new way to address image and layer data on disk. Previously, image and layer data was referenced and stored using a a randomly generated UUID. In the new model this is replaced by a secure content hash.

The new model improves security, provides a built-in way to avoid ID collisions, and guarantees data integrity after pull, push, load, and save operations. It also enables better sharing of layers by allowing many images to freely share their layers even if they didn’t come from the same build.

The diagram below shows an updated version of the previous diagram, highlighting the changes implemented by Docker 1.10.

As can be seen, all image layer IDs are cryptographic hashes, whereas the container ID is still a randomly generated UUID.

There are several things to note regarding the new model. These include:

Migration of existing images
Image and layer filesystem structures

Existing images, those created and pulled by earlier versions of Docker, need to be migrated before they can be used with the new model. This migration involves calculating new secure checksums and is performed automatically the first time you start an updated Docker daemon. After the migration is complete, all images and tags will have brand new secure IDs.

Although the migration is automatic and transparent, it is computationally intensive. This means it and can take time if you have lots of image data. During this time your Docker daemon will not respond to other requests.

A migration tool exists that allows you to migrate existing images to the new format before upgrading your Docker daemon. This means that upgraded Docker daemons do not need to perform the migration in-band, and therefore avoids any associated downtime. It also provides a way to manually migrate existing images so that they can be distributed to other Docker daemons in your environment that are already running the latest versions of Docker.

The migration tool is provided by Docker, Inc., and runs as a container. You can download it from https://github.com/docker/v1.10-migrator/releases.

While running the "migrator" image you need to expose your Docker host's data directory to the container. If you are using the default Docker data path, the command to run the container will look like this

$ sudo docker run --rm -v /var/lib/docker:/var/lib/docker docker/v1.10-migrator

If you use the devicemapper storage driver, you will need to include the --privileged option so that the container has access to your storage devices.

Migration example

The following example shows the migration tool in use on a Docker host running version 1.9.1 of the Docker daemon and the AUFS storage driver. The Docker host is running on a t2.micro AWS EC2 instance with 1 vCPU, 1GB RAM, and a single 8GB general purpose SSD EBS volume. The Docker data directory (/var/lib/docker) was consuming 2GB of space.

$ docker images
REPOSITORY          TAG                 IMAGE ID            CREATED             SIZE
jenkins             latest              285c9f0f9d3d        17 hours ago        708.5 MB
mysql               latest              d39c3fa09ced        8 days ago          360.3 MB
mongo               latest              a74137af4532        13 days ago         317.4 MB
postgres            latest              9aae83d4127f        13 days ago         270.7 MB
redis               latest              8bccd73928d9        2 weeks ago         151.3 MB
centos              latest              c8a648134623        4 weeks ago         196.6 MB
ubuntu              15.04               c8be1ac8145a        7 weeks ago         131.3 MB

$ sudo du -hs /var/lib/docker
2.0G    /var/lib/docker

$ time docker run --rm -v /var/lib/docker:/var/lib/docker docker/v1.10-migrator
Unable to find image 'docker/v1.10-migrator:latest' locally
latest: Pulling from docker/v1.10-migrator
ed1f33c5883d: Pull complete
b3ca410aa2c1: Pull complete
2b9c6ed9099e: Pull complete
dce7e318b173: Pull complete
Digest: sha256:bd2b245d5d22dd94ec4a8417a9b81bb5e90b171031c6e216484db3fe300c2097
Status: Downloaded newer image for docker/v1.10-migrator:latest
time="2016-01-27T12:31:06Z" level=debug msg="Assembling tar data for 01e70da302a553ba13485ad020a0d77dbb47575a31c4f48221137bb08f45878d from /var/lib/docker/aufs/diff/01e70da302a553ba13485ad020a0d77dbb47575a31c4f48221137bb08f45878d"
time="2016-01-27T12:31:06Z" level=debug msg="Assembling tar data for 07ac220aeeef9febf1ac16a9d1a4eff7ef3c8cbf5ed0be6b6f4c35952ed7920d from /var/lib/docker/aufs/diff/07ac220aeeef9febf1ac16a9d1a4eff7ef3c8cbf5ed0be6b6f4c35952ed7920d"
<snip>
time="2016-01-27T12:32:00Z" level=debug msg="layer dbacfa057b30b1feaf15937c28bd8ca0d6c634fc311ccc35bd8d56d017595d5b took 10.80 seconds"

real    0m59.583s
user    0m0.046s
sys     0m0.008s

The Unix time command prepends the docker run command to produce timings for the operation. As can be seen, the overall time taken to migrate 7 images comprising 2GB of disk space took approximately 1 minute. However, this included the time taken to pull the docker/v1.10-migrator image (approximately 3.5 seconds). The same operation on an m4.10xlarge EC2 instance with 40 vCPUs, 160GB RAM and an 8GB provisioned IOPS EBS volume resulted in the following improved timings:

real    0m9.871s
user    0m0.094s
sys     0m0.021s

This shows that the migration operation is affected by the hardware spec of the machine performing the migration.

Container and layers

The major difference between a container and an image is the top writable layer. All writes to the container that add new or modify existing data are stored in this writable layer. When the container is deleted the writable layer is also deleted. The underlying image remains unchanged.

Because each container has its own thin writable container layer, and all changes are stored this container layer, this means that multiple containers can share access to the same underlying image and yet have their own data state. The diagram below shows multiple containers sharing the same Ubuntu 15.04 image.

The Docker storage driver is responsible for enabling and managing both the image layers and the writable container layer. How a storage driver accomplishes these can vary between drivers. Two key technologies behind Docker image and container management are stackable image layers and copy-on-write (CoW).

The copy-on-write strategy

Sharing is a good way to optimize resources. People do this instinctively in daily life. For example, twins Jane and Joseph taking an Algebra class at different times from different teachers can share the same exercise book by passing it between each other. Now, suppose Jane gets an assignment to complete the homework on page 11 in the book. At that point, Jane copies page 11, completes the homework, and hands in her copy. The original exercise book is unchanged and only Jane has a copy of the changed page 11.

Copy-on-write is a similar strategy of sharing and copying. In this strategy, system processes that need the same data share the same instance of that data rather than having their own copy. At some point, if one process needs to modify or write to the data, only then does the operating system make a copy of the data for that process to use. Only the process that needs to write has access to the data copy. All the other processes continue to use the original data.

Docker uses a copy-on-write technology with both images and containers. This CoW strategy optimizes both image disk space usage and the performance of container start times. The next sections look at how copy-on-write is leveraged with images and containers through sharing and copying.

This section looks at image layers and copy-on-write technology. All image and container layers exist inside the Docker host's local storage area and are managed by the storage driver. On Linux-based Docker hosts this is usually located under /var/lib/docker/.

The Docker client reports on image layers when instructed to pull and push images with docker pull and docker push. The command below pulls the ubuntu:15.04 Docker image from Docker Hub.

$ docker pull ubuntu:15.04
15.04: Pulling from library/ubuntu
1ba8ac955b97: Pull complete
f157c4e5ede7: Pull complete
0b7e98f84c4c: Pull complete
a3ed95caeb02: Pull complete
Digest: sha256:5e279a9df07990286cce22e1b0f5b0490629ca6d187698746ae5e28e604a640e
Status: Downloaded newer image for ubuntu:15.04

From the output, you'll see that the command actually pulls 4 image layers. Each of the above lines lists an image layer and its UUID or cryptographic hash. The combination of these four layers makes up the ubuntu:15.04 Docker image.

Each of these layers is stored in its own directory inside the Docker host's local storage are.

Versions of Docker prior to 1.10 stored each layer in a directory with the same name as the image layer ID. However, this is not the case for images pulled with Docker version 1.10 and later. For example, the command below shows an image being pulled from Docker Hub, followed by a directory listing on a host running version 1.9.1 of the Docker Engine.

$  docker pull ubuntu:15.04
15.04: Pulling from library/ubuntu
47984b517ca9: Pull complete
df6e891a3ea9: Pull complete
e65155041eed: Pull complete
c8be1ac8145a: Pull complete
Digest: sha256:5e279a9df07990286cce22e1b0f5b0490629ca6d187698746ae5e28e604a640e
Status: Downloaded newer image for ubuntu:15.04

$ ls /var/lib/docker/aufs/layers
47984b517ca9ca0312aced5c9698753ffa964c2015f2a5f18e5efa9848cf30e2
c8be1ac8145a6e59a55667f573883749ad66eaeef92b4df17e5ea1260e2d7356
df6e891a3ea9cdce2a388a2cf1b1711629557454fd120abd5be6d32329a0e0ac
e65155041eed7ec58dea78d90286048055ca75d41ea893c7246e794389ecf203

Notice how the four directories match up with the layer IDs of the downloaded image. Now compare this with the same operations performed on a host running version 1.10 of the Docker Engine.

$ docker pull ubuntu:15.04
15.04: Pulling from library/ubuntu
1ba8ac955b97: Pull complete
f157c4e5ede7: Pull complete
0b7e98f84c4c: Pull complete
a3ed95caeb02: Pull complete
Digest: sha256:5e279a9df07990286cce22e1b0f5b0490629ca6d187698746ae5e28e604a640e
Status: Downloaded newer image for ubuntu:15.04

$ ls /var/lib/docker/aufs/layers/
1d6674ff835b10f76e354806e16b950f91a191d3b471236609ab13a930275e24
5dbb0cbe0148cf447b9464a358c1587be586058d9a4c9ce079320265e2bb94e7
bef7199f2ed8e86fa4ada1309cfad3089e0542fec8894690529e4c04a7ca2d73
ebf814eccfe98f2704660ca1d844e4348db3b5ccc637eb905d4818fbfb00a06a

See how the four directories do not match up with the image layer IDs pulled in the previous step.

Despite the differences between image management before and after version 1.10, all versions of Docker still allow images to share layers. For example, If you pull an image that shares some of the same image layers as an image that has already been pulled, the Docker daemon recognizes this, and only pulls the layers it doesn't already have stored locally. After the second pull, the two images will share any common image layers.

You can illustrate this now for yourself. Starting with the ubuntu:15.04 image that you just pulled, make a change to it, and build a new image based on the change. One way to do this is using a Dockerfile and the docker build command.

In an empty directory, create a simple Dockerfile that starts with the
ubuntu:15.04 image.
```
 FROM ubuntu:15.04
```
Add a new file called "newfile" in the image's /tmp directory with the
text "Hello world" in it.

When you are done, the Dockerfile contains two lines:
```
 FROM ubuntu:15.04

 RUN echo "Hello world" > /tmp/newfile
```
Save and close the file.
From a terminal in the same folder as your Dockerfile, run the following

command:

 $ docker build -t changed-ubuntu .
 Sending build context to Docker daemon 2.048 kB
 Step 1 : FROM ubuntu:15.04
  ---> 3f7bcee56709
 Step 2 : RUN echo "Hello world" > /tmp/newfile
  ---> Running in d14acd6fad4e
  ---> 94e6b7d2c720
 Removing intermediate container d14acd6fad4e
 Successfully built 94e6b7d2c720

Note: The period (.) at the end of the above command is important. It tells the docker build command to use the current working directory as its build context.

The output above shows a new image with image ID 94e6b7d2c720.

Run the docker images command to verify the new changed-ubuntu image is

in the Docker host's local storage area.

 REPOSITORY       TAG      IMAGE ID       CREATED           SIZE
 changed-ubuntu   latest   03b964f68d06   33 seconds ago    131.4 MB
 ubuntu           15.04    013f3d01d247   6 weeks ago       131.3 MB

Run the docker history command to see which image layers were used to

create the new changed-ubuntu image.

 $ docker history changed-ubuntu
 IMAGE               CREATED              CREATED BY                                      SIZE        COMMENT
 94e6b7d2c720        2 minutes ago       /bin/sh -c echo "Hello world" > /tmp/newfile    12 B 
 3f7bcee56709        6 weeks ago         /bin/sh -c #(nop) CMD ["/bin/bash"]             0 B  
 <missing>           6 weeks ago         /bin/sh -c sed -i 's/^#\s*\(deb.*universe\)$/   1.879 kB
 <missing>           6 weeks ago         /bin/sh -c echo '#!/bin/sh' > /usr/sbin/polic   701 B
 <missing>           6 weeks ago         /bin/sh -c #(nop) ADD file:8e4943cd86e9b2ca13   131.3 MB

The docker history output shows the new 94e6b7d2c720 image layer at the top. You know that this is the new image layer added because it was created by the echo "Hello world" > /tmp/newfile command in your Dockerfile. The 4 image layers below it are the exact same image layers that make up the ubuntu:15.04 image.

Note: Under the content addressable storage model introduced with Docker 1.10, image history data is no longer stored in a config file with each image layer. It is now stored as a string of text in a single config file that relates to the overall image. This can result in some image layers showing as "missing" in the output of the docker history command. This is normal behaviour and can be ignored.

You may hear images like these referred to as flat images.

Notice the new changed-ubuntu image does not have its own copies of every layer. As can be seen in the diagram below, the new image is sharing its four underlying layers with the ubuntu:15.04 image.

The docker history command also shows the size of each image layer. As you can see, the 94e6b7d2c720 layer is only consuming 12 Bytes of disk space. This means that the changed-ubuntu image we just created is only consuming an additional 12 Bytes of disk space on the Docker host - all layers below the 94e6b7d2c720 layer already exist on the Docker host and are shared by other images.

This sharing of image layers is what makes Docker images and containers so space efficient.

Copying makes containers efficient

You learned earlier that a container is a Docker image with a thin writable, container layer added. The diagram below shows the layers of a container based on the ubuntu:15.04 image:

All writes made to a container are stored in the thin writable container layer. The other layers are read-only (RO) image layers and can't be changed. This means that multiple containers can safely share a single underlying image. The diagram below shows multiple containers sharing a single copy of the ubuntu:15.04 image. Each container has its own thin RW layer, but they all share a single instance of the ubuntu:15.04 image:

When an existing file in a container is modified, Docker uses the storage driver to perform a copy-on-write operation. The specifics of operation depends on the storage driver. For the AUFS and OverlayFS storage drivers, the copy-on-write operation is pretty much as follows:

Search through the image layers for the file to update. The process starts at the top, newest layer and works down to the base layer one layer at a time.
Perform a "copy-up" operation on the first copy of the file that is found. A "copy up" copies the file up to the container's own thin writable layer.
Modify the copy of the file in container's thin writable layer.

Btrfs, ZFS, and other drivers handle the copy-on-write differently. You can read more about the methods of these drivers later in their detailed descriptions.

Containers that write a lot of data will consume more space than containers that do not. This is because most write operations consume new space in the container's thin writable top layer. If your container needs to write a lot of data, you should consider using a data volume.

A copy-up operation can incur a noticeable performance overhead. This overhead is different depending on which storage driver is in use. However, large files, lots of layers, and deep directory trees can make the impact more noticeable. Fortunately, the operation only occurs the first time any particular file is modified. Subsequent modifications to the same file do not cause a copy-up operation and can operate directly on the file's existing copy already present in the container layer.

Let's see what happens if we spin up 5 containers based on our changed-ubuntu image we built earlier:

From a terminal on your Docker host, run the following docker run command 5 times.

 $ docker run -dit changed-ubuntu bash
 75bab0d54f3cf193cfdc3a86483466363f442fba30859f7dcd1b816b6ede82d4
 $ docker run -dit changed-ubuntu bash
 9280e777d109e2eb4b13ab211553516124a3d4d4280a0edfc7abf75c59024d47
 $ docker run -dit changed-ubuntu bash
 a651680bd6c2ef64902e154eeb8a064b85c9abf08ac46f922ad8dfc11bb5cd8a
 $ docker run -dit changed-ubuntu bash
 8eb24b3b2d246f225b24f2fca39625aaad71689c392a7b552b78baf264647373
 $ docker run -dit changed-ubuntu bash
 0ad25d06bdf6fca0dedc38301b2aff7478b3e1ce3d1acd676573bba57cb1cfef

This launches 5 containers based on the changed-ubuntu image. As each container is created, Docker adds a writable layer and assigns it a random UUID. This is the value returned from the docker run command.

Run the docker ps command to verify the 5 containers are running.

 $ docker ps
 CONTAINER ID    IMAGE             COMMAND    CREATED              STATUS              PORTS    NAMES
 0ad25d06bdf6    changed-ubuntu    "bash"     About a minute ago   Up About a minute            stoic_ptolemy
 8eb24b3b2d24    changed-ubuntu    "bash"     About a minute ago   Up About a minute            pensive_bartik
 a651680bd6c2    changed-ubuntu    "bash"     2 minutes ago        Up 2 minutes                 hopeful_turing
 9280e777d109    changed-ubuntu    "bash"     2 minutes ago        Up 2 minutes                 backstabbing_mahavira
 75bab0d54f3c    changed-ubuntu    "bash"     2 minutes ago        Up 2 minutes                 boring_pasteur

The output above shows 5 running containers, all sharing the changed-ubuntu image. Each CONTAINER ID is derived from the UUID when creating each container.

List the contents of the local storage area.

 $ sudo ls /var/lib/docker/containers
 0ad25d06bdf6fca0dedc38301b2aff7478b3e1ce3d1acd676573bba57cb1cfef
 9280e777d109e2eb4b13ab211553516124a3d4d4280a0edfc7abf75c59024d47
 75bab0d54f3cf193cfdc3a86483466363f442fba30859f7dcd1b816b6ede82d4
 a651680bd6c2ef64902e154eeb8a064b85c9abf08ac46f922ad8dfc11bb5cd8a
 8eb24b3b2d246f225b24f2fca39625aaad71689c392a7b552b78baf264647373

Docker's copy-on-write strategy not only reduces the amount of space consumed by containers, it also reduces the time required to start a container. At start time, Docker only has to create the thin writable layer for each container. The diagram below shows these 5 containers sharing a single read-only (RO) copy of the changed-ubuntu image.

If Docker had to make an entire copy of the underlying image stack each time it started a new container, container start times and disk space used would be significantly increased.

Data volumes and the storage driver

When a container is deleted, any data written to the container that is not stored in a data volume is deleted along with the container.

A data volume is a directory or file in the Docker host's filesystem that is mounted directly into a container. Data volumes are not controlled by the storage driver. Reads and writes to data volumes bypass the storage driver and operate at native host speeds. You can mount any number of data volumes into a container. Multiple containers can also share one or more data volumes.

The diagram below shows a single Docker host running two containers. Each container exists inside of its own address space within the Docker host's local storage area (/var/lib/docker/...). There is also a single shared data volume located at /data on the Docker host. This is mounted directly into both containers.

Data volumes reside outside of the local storage area on the Docker host, further reinforcing their independence from the storage driver's control. When a container is deleted, any data stored in data volumes persists on the Docker host.

For detailed information about data volumes Managing data in containers.

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